Generate randomly rarefied matrix from input matrix
Generating randomly rarefied matrix from input matrix
Thanks to Pamela Weisenhorn for designing the essential behavior of this app.
Related Publications
- Jari Oksanen, F. Guillaume Blanchet, Michael Friendly, Roeland Kindt, Pierre Legendre, Dan McGlinn, Peter R. Minchin, R. B. O'Hara, Gavin L. Simpson, Peter Solymos, M. Henry H. Stevens, Eduard Szoecs and Helene Wagner (2019). vegan: Community Ecology Package. R package version 2.5-6. https://CRAN.R-project.org/package=vegan ,
- Hurlbert, S.H. (1971). The nonconcept of species diversity: a critique and alternative parameters. Ecology 52, 577--586. ,
- Heck, K.L., van Belle, G. & Simberloff, D. (1975). Explicit calculation of the rarefaction diversity measurement and the determination of sufficient sample size. Ecology 56 ,
App Specification:
https://github.com/kbaseapps/GenericsAPI/tree/2d68b13be4bf7278817cbfef949777a03ea1bda7/ui/narrative/methods/rarefy_matrixModule Commit: 2d68b13be4bf7278817cbfef949777a03ea1bda7