Explore an Expression Matrix as a sortable heatmap of selected features.
View and explore expression data as a sortable heatmap. Features (genes) are displayed on each row with some summary statistics averaged across the selected conditions. The features can be sorted by those values. Each of the selected conditions is represented in a simple heatmap in the table. Mouse over the heatmap to view specific expression values.
The input is a .tsv file with "gene-id" listed in the A1 cell, the gene ids listed in the A column, the sample/conditions identifiers in the 1 row, and expression values that correspond to the gene-ids and sample throughout. For a comprehensive guide to formatting your expression data for import into KBase, see the Data Upload/Download Guide.
- Arkin AP, Cottingham RW, Henry CS, Harris NL, Stevens RL, Maslov S, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature Biotechnology. 2018;36: 566. doi: 10.1038/nbt.4163 , https://www.nature.com/articles/nbt.4163
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