Explore pairwise correlation values of selected features as a heatmap.
This method allows you to view and explore pairwise correlation of selected features as a heatmap. Click on the Hide/Show Selected Features button on the top of the heatmap to view and sort the summary statistics of expression values for selected features. Mouse over the heatmap to view specific correlation values.
The input is a .tsv file with "gene-id" listed in the A1 cell, the gene ids listed in the A column, the sample/conditions identifiers in the 1 row, and expression values that correspond to the gene-ids and sample throughout. For a comprehensive guide to formatting your expression data for import into KBase, see the Data Upload/Download Guide.
Team members who developed & deployed algorithm in KBase: Paramvir Dehal, Roman Sutormin, Michael Sneddon, Srividya Ramakrishnan, Pavel Novichkov, Keith Keller.
- Arkin AP, Cottingham RW, Henry CS, Harris NL, Stevens RL, Maslov S, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature Biotechnology. 2018;36: 566. doi: 10.1038/nbt.4163 , https://www.nature.com/articles/nbt.4163
Module Commit: 6cdc50905a08883a53333c073abe1e1df7b3f97f