App Catalog
Sign Up Sign In
Fit Model to Exometabolite Data
fba_tools

v.2.2.1

By: chenry

Launch

Identify the minimal set of biochemical reactions to add to a draft metabolic model to enable production and consumption of as many exometabolites as possible

This algorithm adds a drain flux for each exometabolite and forces these drains to operate in the approapriate direction.

Team members who developed & deployed algorithm in KBase: Chris Henry, Janaka Edirisinghe, Jose Faria, Trent Northen, Ben Bowen. For questions, e-mail [email protected]

Related Publications


App Specification:

https://github.com/cshenry/fba_tools/tree/b083384ac00d4f9d7cb796a664ee3ffd017cf248/ui/narrative/methods/fit_exometabolite_data

Module Commit: b083384ac00d4f9d7cb796a664ee3ffd017cf248