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Trim SpeciesTree to GenomeSet- v1.4.0
By: dylan


Allows users to reduce a SpeciesTree to match the genomes in a GenomeSet.

This App allows the user to trim a Species Tree to just include the Genomes that are found in a GenomeSet. The trimmed tree is then offered as a static image and provided as links to download the image in PNG and PDF formats. One can also download a file containing the NEWICK representation of the tree (with identifiers or labels). There is also button ( View report in separate window ) and a link to open a new web page with just the image of the tree.

Team members who developed & deployed algorithm in KBase: Dylan Chivian. For questions, please contact us.

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App Specification:

Module Commit: aed8564fcf4c6e8a3e94f6546715496e6fffbd84