Input data and parameters 

Samples

Testosterone_trimm_paired_alignment /kb/module/work/tmp/download_f2780a86-43b6-4a18-8032-0ace30e37b6c/accepted_hits_stats
Estrone_trimm_paired_alignment /kb/module/work/tmp/download_ff1ebadb-389a-41b0-ae54-5b4c3d0ad25c/accepted_hits_stats
Cholesterol_trimm_paired_alignment /kb/module/work/tmp/download_4c9202b6-b23b-4276-97d3-2528af1950c0/accepted_hits_stats

Summary 

Globals

Number of samples 3
Total number of mapped reads 52,259,729
Mean samples coverage 11,512.29
Mean samples GC-content 65.75
Mean samples mapping quality 59.12
Mean samples insert size 286

Sample statistics

Sample name Coverage mean Coverage std GC percentage Mapping quality mean Insert size median
Testosterone_trimm_paired_alignment 9188.5112 16388.8469 65.94 59.1101 281.0
Estrone_trimm_paired_alignment 6751.9118 11361.7389 66.17 59.1303 300.0
Cholesterol_trimm_paired_alignment 18596.4496 26718.9145 65.13 59.1229 277.0

PCA 

Coverage Across Reference 

Coverage Histogram (0 - 998590X) 

Global Coverage Histogram 

Genome Fraction Coverage 

Duplication Rate Histogram 

Mapped reads GC-content 

Mapped Reads Clipping Profile 

Mapped Reads GC-content Distribution 

Mapping Quality Across Reference 

Mapping Quality Histogram 

Insert Size Across Reference 

Insert Size Histogram