Generated March 17, 2024

Metabolic models from "Formation of a constructed microbial community in a nutrient rich environment indicates bacterial interspecific competition."

This Narrative is the parent for the three Narratives referenced in "Formation of a constructed microbial community in a nutrient rich environment indicates bacterial interspecific competition."(1)

These Narratives were used to generate metabolic models of the following strains:

StrainStatic Narrative URLLive Narrative URL
Sphingobium sp. AP49https://kbase.us/n/117923/15/https://narrative.kbase.us/narrative/117923
Pantoea sp. YR343https://kbase.us/n/117919/16/https://narrative.kbase.us/narrative/117919
Pseudomonas sp. GM17 https://kbase.us/n/117918/17/https://narrative.kbase.us/narrative/117918

The metabolic model of these strains were further used for dynamic flux balance analysis (dFBA) simulation by Computation of Microbial Ecosystems in Time and Space (COMETS) tool.

References

  1. Wang J, Appidi MR, Burdick LH, Abraham PE, Hettich RL, Pelletier DA, Doktycz MJ. 2024. Formation of a constructed microbial community in a nutrient-rich environment indicates bacterial interspecific competition. mSystems. American Society for Microbiology.