Getting long reads (from reads library object).
command: filtlong --min_length 1000 --keep_percent 90 --target_bases 500000000 /kb/module/work/tmp/204614ba-f403-434b-80ac-068ce07003d3.single.fastq > /kb/module/work/tmp/filtlong_output_aeb870f6-032b-48c5-9732-36d68c852371.fastq
Scoring long reads
53 reads (502645 bp)
113 reads (989938 bp)
190 reads (1474860 bp)
250 reads (1961662 bp)
305 reads (2498707 bp)
339 reads (2992678 bp)
395 reads (3480481 bp)
444 reads (3983300 bp)
486 reads (4471761 bp)
527 reads (4965714 bp)
575 reads (5464062 bp)
605 reads (5973029 bp)
663 reads (6465867 bp)
714 reads (6956435 bp)
760 reads (7474466 bp)
811 reads (7972186 bp)
878 reads (8473166 bp)
931 reads (8957899 bp)
1047 reads (9442862 bp)
1111 reads (9939809 bp)
1198 reads (10428352 bp)
1266 reads (10919878 bp)
1318 reads (11421143 bp)
1379 reads (11907805 bp)
1456 reads (12396472 bp)
1495 reads (12895669 bp)
1559 reads (13389890 bp)
1612 reads (13888483 bp)
1677 reads (14388265 bp)
1699 reads (14875669 bp)
1774 reads (15360650 bp)
1836 reads (15873199 bp)
1883 reads (16378077 bp)
1933 reads (16867300 bp)
2005 reads (17351671 bp)
2085 reads (17838303 bp)
2168 reads (18334134 bp)
2292 reads (18845582 bp)
2423 reads (19357083 bp)
2474 reads (19866770 bp)
2508 reads (20358869 bp)
2566 reads (20873907 bp)
2616 reads (21384117 bp)
2680 reads (21868725 bp)
2738 reads (22365301 bp)
2788 reads (22858493 bp)
2838 reads (23354436 bp)
2896 reads (23843480 bp)
2938 reads (24335061 bp)
2946 reads (24824194 bp)
2982 reads (25318830 bp)
3025 reads (25817532 bp)
3091 reads (26306971 bp)
3169 reads (26820223 bp)
3216 reads (27316409 bp)
3267 reads (27818925 bp)
3314 reads (28316137 bp)
3323 reads (28854419 bp)
3357 reads (29339104 bp)
3451 reads (29840706 bp)
3525 reads (30349172 bp)
3590 reads (30843036 bp)
3613 reads (31380276 bp)
3641 reads (31872034 bp)
3657 reads (32441732 bp)
3714 reads (32958323 bp)
3754 reads (33442392 bp)
3828 reads (33934823 bp)
3880 reads (34437808 bp)
3962 reads (34925468 bp)
4044 reads (35410905 bp)
4112 reads (35914436 bp)
4177 reads (36401911 bp)
4283 reads (36887676 bp)
4339 reads (37373372 bp)
4416 reads (37863011 bp)
4486 reads (38346637 bp)
4542 reads (38830532 bp)
4631 reads (39315402 bp)
4711 reads (39800402 bp)
4802 reads (40299572 bp)
4865 reads (40784277 bp)
4921 reads (41299606 bp)
4943 reads (41790954 bp)
5015 reads (42286392 bp)
5085 reads (42773844 bp)
5116 reads (43332173 bp)
5155 reads (43820738 bp)
5207 reads (44305409 bp)
5265 reads (44820402 bp)
5308 reads (45362809 bp)
5397 reads (45863300 bp)
5438 reads (46362527 bp)
5479 reads (46849837 bp)
5502 reads (47413350 bp)
5556 reads (47901526 bp)
5609 reads (48394755 bp)
5633 reads (48892235 bp)
5693 reads (49384187 bp)
5744 reads (49870471 bp)
5913 reads (50368228 bp)
5988 reads (50860240 bp)
6050 reads (51344242 bp)
6123 reads (51829711 bp)
6162 reads (52317070 bp)
6219 reads (52802007 bp)
6285 reads (53289205 bp)
6351 reads (53800519 bp)
6410 reads (54288643 bp)
6451 reads (54779427 bp)
6499 reads (55275210 bp)
6573 reads (55760246 bp)
6626 reads (56246768 bp)
6679 reads (56730862 bp)
6754 reads (57237456 bp)
6849 reads (57722494 bp)
6910 reads (58219371 bp)
6981 reads (58703300 bp)
7060 reads (59192001 bp)
7129 reads (59687497 bp)
7188 reads (60197386 bp)
7249 reads (60684831 bp)
7300 reads (61170787 bp)
7353 reads (61680524 bp)
7363 reads (62184408 bp)
7415 reads (62672359 bp)
7481 reads (63190418 bp)
7553 reads (63695349 bp)
7611 reads (64181377 bp)
7700 reads (64727923 bp)
7772 reads (65225325 bp)
7834 reads (65712801 bp)
7877 reads (66197995 bp)
7959 reads (66682273 bp)
8016 reads (67168113 bp)
8097 reads (67701560 bp)
8136 reads (68243178 bp)
8171 reads (68730827 bp)
8230 reads (69215481 bp)
8319 reads (69717825 bp)
8386 reads (70229669 bp)
8441 reads (70734788 bp)
8509 reads (71237289 bp)
8603 reads (71733213 bp)
8673 reads (72227047 bp)
8721 reads (72717495 bp)
8791 reads (73203593 bp)
8887 reads (73687569 bp)
8953 reads (74178663 bp)
9020 reads (74682469 bp)
9096 reads (75170998 bp)
9166 reads (75686233 bp)
9278 reads (76186470 bp)
9342 reads (76678940 bp)
9409 reads (77165389 bp)
9494 reads (77656511 bp)
9562 reads (78144013 bp)
9639 reads (78627710 bp)
9686 reads (79114796 bp)
9746 reads (79602516 bp)
9779 reads (80168820 bp)
9838 reads (80674398 bp)
9905 reads (81173493 bp)
9993 reads (81663103 bp)
10039 reads (82166358 bp)
10084 reads (82663451 bp)
10129 reads (83147735 bp)
10171 reads (83652131 bp)
10227 reads (84144632 bp)
10310 reads (84629083 bp)
10361 reads (85113700 bp)
10412 reads (85598334 bp)
10519 reads (86097492 bp)
10590 reads (86603110 bp)
10658 reads (87089169 bp)
10700 reads (87596707 bp)
10709 reads (88084583 bp)
10733 reads (88636676 bp)
10811 reads (89125147 bp)
10871 reads (89609859 bp)
10931 reads (90117787 bp)
10997 reads (90610581 bp)
11049 reads (91102965 bp)
11123 reads (91590339 bp)
11179 reads (92079666 bp)
11227 reads (92568814 bp)
11283 reads (93055540 bp)
11313 reads (93566151 bp)
11380 reads (94050200 bp)
11443 reads (94537532 bp)
11497 reads (95021559 bp)
11553 reads (95528147 bp)
11592 reads (96013191 bp)
11710 reads (96498916 bp)
11794 reads (96983489 bp)
11866 reads (97469641 bp)
11918 reads (97964240 bp)
11962 reads (98451974 bp)
12020 reads (98946010 bp)
12089 reads (99436876 bp)
12139 reads (99921149 bp)
12214 reads (100407675 bp)
12274 reads (100893129 bp)
12329 reads (101397661 bp)
12384 reads (101909932 bp)
12405 reads (102401705 bp)
12457 reads (102889783 bp)
12498 reads (103376464 bp)
12540 reads (103866300 bp)
12601 reads (104364834 bp)
12650 reads (104849390 bp)
12727 reads (105334953 bp)
12798 reads (105833025 bp)
12871 reads (106319962 bp)
12958 reads (106806120 bp)
13029 reads (107300771 bp)
13097 reads (107795134 bp)
13149 reads (108302810 bp)
13197 reads (108800207 bp)
13258 reads (109300216 bp)
13338 reads (109806548 bp)
13390 reads (110309328 bp)
13461 reads (110809177 bp)
13509 reads (111306023 bp)
13554 reads (111792405 bp)
13604 reads (112337940 bp)
13633 reads (112823261 bp)
13697 reads (113307036 bp)
13755 reads (113800349 bp)
13821 reads (114314909 bp)
13915 reads (114805644 bp)
13966 reads (115289624 bp)
14056 reads (115777563 bp)
14141 reads (116272069 bp)
14190 reads (116764801 bp)
14219 reads (117273548 bp)
14281 reads (117760642 bp)
14326 reads (118249022 bp)
14378 reads (118738318 bp)
14442 reads (119222725 bp)
14455 reads (119713693 bp)
14507 reads (120197782 bp)
14553 reads (120724112 bp)
14650 reads (121208089 bp)
14709 reads (121709515 bp)
14765 reads (122195048 bp)
14847 reads (122689116 bp)
14898 reads (123177037 bp)
14992 reads (123661164 bp)
15067 reads (124147666 bp)
15122 reads (124641710 bp)
15189 reads (125129143 bp)
15216 reads (125625883 bp)
15268 reads (126111884 bp)
15342 reads (126598880 bp)
15438 reads (127095160 bp)
15532 reads (127581721 bp)
15604 reads (128067295 bp)
15650 reads (128558232 bp)
15696 reads (129054299 bp)
15763 reads (129548245 bp)
15824 reads (130058695 bp)
15881 reads (130545583 bp)
15970 reads (131034844 bp)
16018 reads (131549534 bp)
16075 reads (132039831 bp)
16141 reads (132533605 bp)
16175 reads (133026136 bp)
16214 reads (133515951 bp)
16295 reads (134066617 bp)
16342 reads (134550529 bp)
16406 reads (135036956 bp)
16459 reads (135521023 bp)
16506 reads (136030022 bp)
16565 reads (136553955 bp)
16594 reads (137045503 bp)
16651 reads (137530503 bp)
16723 reads (138035785 bp)
16776 reads (138522517 bp)
16825 reads (139007436 bp)
16875 reads (139494932 bp)
16954 reads (139992830 bp)
17000 reads (140484682 bp)
17063 reads (141001715 bp)
17116 reads (141490613 bp)
17186 reads (141987766 bp)
17272 reads (142481138 bp)
17314 reads (142968683 bp)
17400 reads (143466286 bp)
17461 reads (143960957 bp)
17520 reads (144460054 bp)
17620 reads (144962372 bp)
17676 reads (145450166 bp)
17719 reads (145943089 bp)
17774 reads (146435927 bp)
17842 reads (146922099 bp)
17921 reads (147415080 bp)
17949 reads (147921052 bp)
17960 reads (148442714 bp)
18017 reads (148933221 bp)
18071 reads (149436018 bp)
18134 reads (149925803 bp)
18166 reads (150409827 bp)
18241 reads (150893898 bp)
18296 reads (151392713 bp)
18373 reads (151883069 bp)
18435 reads (152366688 bp)
18523 reads (152871892 bp)
18554 reads (153390832 bp)
18606 reads (153881603 bp)
18664 reads (154365650 bp)
18704 reads (154867792 bp)
18798 reads (155398960 bp)
18849 reads (155893877 bp)
18886 reads (156427452 bp)
19003 reads (156915739 bp)
19080 reads (157410193 bp)
19156 reads (157928222 bp)
19212 reads (158454280 bp)
19257 reads (158944797 bp)
19305 reads (159459573 bp)
19394 reads (159952068 bp)
19458 reads (160438217 bp)
19516 reads (160930157 bp)
19582 reads (161415757 bp)
19646 reads (161906888 bp)
19729 reads (162400289 bp)
19791 reads (162889917 bp)
19848 reads (163375858 bp)
19905 reads (163875029 bp)
19958 reads (164369605 bp)
20006 reads (164874788 bp)
20071 reads (165369379 bp)
20111 reads (165869106 bp)
20162 reads (166354179 bp)
20175 reads (166846118 bp)
20185 reads (167349861 bp)
20193 reads (167894607 bp)
20274 reads (168379795 bp)
20320 reads (168865632 bp)
20366 reads (169352300 bp)
20442 reads (169858258 bp)
20491 reads (170348928 bp)
20570 reads (170833661 bp)
20616 reads (171319142 bp)
20655 reads (171816231 bp)
20685 reads (172305021 bp)
20782 reads (172804343 bp)
20856 reads (173295386 bp)
20882 reads (173821335 bp)
20980 reads (174311259 bp)
21035 reads (174798886 bp)
21100 reads (175294154 bp)
21127 reads (175831568 bp)
21198 reads (176340027 bp)
21252 reads (176825634 bp)
21347 reads (177312745 bp)
21411 reads (177800004 bp)
21482 reads (178283909 bp)
21539 reads (178768090 bp)
21579 reads (179301146 bp)
21617 reads (179811194 bp)
21657 reads (180297900 bp)
21718 reads (180784511 bp)
21773 reads (181292768 bp)
21852 reads (181779358 bp)
21905 reads (182269605 bp)
21918 reads (182754358 bp)
22014 reads (183272251 bp)
22113 reads (183787885 bp)
22180 reads (184277739 bp)
22259 reads (184787694 bp)
22326 reads (185292881 bp)
22378 reads (185776723 bp)
22445 reads (186262402 bp)
22490 reads (186753641 bp)
22615 reads (187237531 bp)
22673 reads (187752378 bp)
22694 reads (188268585 bp)
22732 reads (188752642 bp)
22781 reads (189251659 bp)
22825 reads (189737343 bp)
22881 reads (190222447 bp)
22900 reads (190747564 bp)
22924 reads (191235163 bp)
22994 reads (191744537 bp)
23070 reads (192229213 bp)
23139 reads (192714845 bp)
23201 reads (193206413 bp)
23257 reads (193693737 bp)
23352 reads (194210739 bp)
23441 reads (194697953 bp)
23497 reads (195193111 bp)
23553 reads (195695460 bp)
23606 reads (196188732 bp)
23696 reads (196693584 bp)
23755 reads (197178811 bp)
23799 reads (197681965 bp)
23880 reads (198166954 bp)
23947 reads (198666849 bp)
24019 reads (199154939 bp)
24097 reads (199641634 bp)
24166 reads (200126053 bp)
24231 reads (200611093 bp)
24296 reads (201095169 bp)
24349 reads (201579368 bp)
24362 reads (202110010 bp)
24372 reads (202634746 bp)
24388 reads (203119460 bp)
24489 reads (203603128 bp)
24557 reads (204097939 bp)
24600 reads (204601220 bp)
24714 reads (205088424 bp)
24726 reads (205427650 bp)
Filtering long reads
target: 184884885 bp
keeping 184890681 bp
Outputting passed long reads
Uploading filtered reads: filtlong16.reads
Generating and saving report.
Filtlong results saved.
