The RAST algorithm was applied to annotating a genome sequence comprised of 155 contigs containing 4541543 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3884 new features were called, of which 50 are non-coding.
Output genome has the following feature types:
Coding gene 3834
Non-coding crispr_array 1
Non-coding crispr_repeat 7
Non-coding crispr_spacer 6
Non-coding repeat 2
Non-coding rna 34
Overall, the genes have 1738 distinct functions.
The genes include 1834 genes with a SEED annotation ontology across 865 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.017.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 237 contigs containing 4391776 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 4914 new features were called, of which 354 are non-coding.
Output genome has the following feature types:
Coding gene 4560
Non-coding crispr_array 2
Non-coding crispr_repeat 147
Non-coding crispr_spacer 145
Non-coding prophage 2
Non-coding repeat 18
Non-coding rna 40
Overall, the genes have 2598 distinct functions.
The genes include 1890 genes with a SEED annotation ontology across 1171 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.019.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 413 contigs containing 4740206 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 5069 new features were called, of which 64 are non-coding.
Output genome has the following feature types:
Coding gene 5005
Non-coding repeat 24
Non-coding rna 40
Overall, the genes have 2743 distinct functions.
The genes include 1953 genes with a SEED annotation ontology across 1090 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.022.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 118 contigs containing 3210281 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3225 new features were called, of which 125 are non-coding.
Output genome has the following feature types:
Coding gene 3100
Non-coding crispr_array 2
Non-coding crispr_repeat 43
Non-coding crispr_spacer 42
Non-coding prophage 2
Non-coding repeat 4
Non-coding rna 32
Overall, the genes have 1320 distinct functions.
The genes include 1404 genes with a SEED annotation ontology across 740 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.023.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 365 contigs containing 3132682 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3178 new features were called, of which 33 are non-coding.
Output genome has the following feature types:
Coding gene 3145
Non-coding repeat 2
Non-coding rna 31
Overall, the genes have 1868 distinct functions.
The genes include 1585 genes with a SEED annotation ontology across 1031 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.026.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 61 contigs containing 2209601 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 2343 new features were called, of which 139 are non-coding.
Output genome has the following feature types:
Coding gene 2204
Non-coding crispr_array 2
Non-coding crispr_repeat 44
Non-coding crispr_spacer 42
Non-coding prophage 1
Non-coding repeat 4
Non-coding rna 46
Overall, the genes have 1205 distinct functions.
The genes include 1197 genes with a SEED annotation ontology across 769 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.030.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 153 contigs containing 3684022 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3535 new features were called, of which 219 are non-coding.
Output genome has the following feature types:
Coding gene 3316
Non-coding crispr_array 1
Non-coding crispr_repeat 84
Non-coding crispr_spacer 83
Non-coding prophage 1
Non-coding repeat 6
Non-coding rna 44
Overall, the genes have 1305 distinct functions.
The genes include 1693 genes with a SEED annotation ontology across 737 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.032.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 164 contigs containing 4614825 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3895 new features were called, of which 88 are non-coding.
Output genome has the following feature types:
Coding gene 3807
Non-coding crispr_array 2
Non-coding crispr_repeat 9
Non-coding crispr_spacer 7
Non-coding prophage 1
Non-coding repeat 35
Non-coding rna 34
Overall, the genes have 1718 distinct functions.
The genes include 1854 genes with a SEED annotation ontology across 850 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.033.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 82 contigs containing 2867199 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 2784 new features were called, of which 47 are non-coding.
Output genome has the following feature types:
Coding gene 2737
Non-coding repeat 6
Non-coding rna 41
Overall, the genes have 1909 distinct functions.
The genes include 1427 genes with a SEED annotation ontology across 1112 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.035.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 35 contigs containing 4294648 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3821 new features were called, of which 46 are non-coding.
Output genome has the following feature types:
Coding gene 3775
Non-coding prophage 2
Non-coding rna 44
Overall, the genes have 1697 distinct functions.
The genes include 1781 genes with a SEED annotation ontology across 898 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.002.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 183 contigs containing 2716435 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 2659 new features were called, of which 42 are non-coding.
Output genome has the following feature types:
Coding gene 2617
Non-coding repeat 4
Non-coding rna 38
Overall, the genes have 1466 distinct functions.
The genes include 1446 genes with a SEED annotation ontology across 798 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.015.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 36 contigs containing 4935777 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 4750 new features were called, of which 411 are non-coding.
Output genome has the following feature types:
Coding gene 4339
Non-coding crispr_array 2
Non-coding crispr_repeat 158
Non-coding crispr_spacer 156
Non-coding prophage 4
Non-coding repeat 43
Non-coding rna 48
Overall, the genes have 1394 distinct functions.
The genes include 2366 genes with a SEED annotation ontology across 876 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.001.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 135 contigs containing 2810734 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3084 new features were called, of which 263 are non-coding.
Output genome has the following feature types:
Coding gene 2821
Non-coding crispr_array 1
Non-coding crispr_repeat 97
Non-coding crispr_spacer 96
Non-coding repeat 31
Non-coding rna 38
Overall, the genes have 1306 distinct functions.
The genes include 1336 genes with a SEED annotation ontology across 731 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.016.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 135 contigs containing 4948386 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 4728 new features were called, of which 300 are non-coding.
Output genome has the following feature types:
Coding gene 4428
Non-coding crispr_array 2
Non-coding crispr_repeat 127
Non-coding crispr_spacer 125
Non-coding prophage 2
Non-coding repeat 4
Non-coding rna 40
Overall, the genes have 1632 distinct functions.
The genes include 2008 genes with a SEED annotation ontology across 906 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.062.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 174 contigs containing 3102702 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3324 new features were called, of which 238 are non-coding.
Output genome has the following feature types:
Coding gene 3086
Non-coding crispr_array 1
Non-coding crispr_repeat 93
Non-coding crispr_spacer 92
Non-coding repeat 17
Non-coding rna 35
Overall, the genes have 2098 distinct functions.
The genes include 1434 genes with a SEED annotation ontology across 1054 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.059.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 28 contigs containing 5243107 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 5408 new features were called, of which 390 are non-coding.
Output genome has the following feature types:
Coding gene 5018
Non-coding crispr_array 5
Non-coding crispr_repeat 162
Non-coding crispr_spacer 157
Non-coding prophage 1
Non-coding repeat 20
Non-coding rna 45
Overall, the genes have 2230 distinct functions.
The genes include 2488 genes with a SEED annotation ontology across 1157 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.007.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 131 contigs containing 2061093 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 2139 new features were called, of which 37 are non-coding.
Output genome has the following feature types:
Coding gene 2102
Non-coding repeat 2
Non-coding rna 35
Overall, the genes have 1181 distinct functions.
The genes include 1175 genes with a SEED annotation ontology across 762 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.008.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 64 contigs containing 3525485 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3635 new features were called, of which 358 are non-coding.
Output genome has the following feature types:
Coding gene 3277
Non-coding crispr_array 1
Non-coding crispr_repeat 157
Non-coding crispr_spacer 156
Non-coding rna 44
Overall, the genes have 1794 distinct functions.
The genes include 1726 genes with a SEED annotation ontology across 900 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.064.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 138 contigs containing 2516031 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 2692 new features were called, of which 123 are non-coding.
Output genome has the following feature types:
Coding gene 2569
Non-coding crispr_array 2
Non-coding crispr_repeat 45
Non-coding crispr_spacer 43
Non-coding repeat 2
Non-coding rna 31
Overall, the genes have 1289 distinct functions.
The genes include 1392 genes with a SEED annotation ontology across 819 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.009.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 172 contigs containing 4133015 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 4238 new features were called, of which 61 are non-coding.
Output genome has the following feature types:
Coding gene 4177
Non-coding repeat 22
Non-coding rna 39
Overall, the genes have 2018 distinct functions.
The genes include 1997 genes with a SEED annotation ontology across 1100 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.010.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 110 contigs containing 3369119 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3247 new features were called, of which 50 are non-coding.
Output genome has the following feature types:
Coding gene 3197
Non-coding prophage 2
Non-coding repeat 13
Non-coding rna 35
Overall, the genes have 1457 distinct functions.
The genes include 1486 genes with a SEED annotation ontology across 815 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.011.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 49 contigs containing 3935801 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3515 new features were called, of which 61 are non-coding.
Output genome has the following feature types:
Coding gene 3454
Non-coding repeat 24
Non-coding rna 37
Overall, the genes have 1605 distinct functions.
The genes include 1614 genes with a SEED annotation ontology across 875 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.012.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 110 contigs containing 3107186 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 2956 new features were called, of which 47 are non-coding.
Output genome has the following feature types:
Coding gene 2909
Non-coding repeat 2
Non-coding rna 45
Overall, the genes have 1669 distinct functions.
The genes include 1570 genes with a SEED annotation ontology across 992 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.005.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 85 contigs containing 2716559 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 2478 new features were called, of which 42 are non-coding.
Output genome has the following feature types:
Coding gene 2436
Non-coding repeat 5
Non-coding rna 37
Overall, the genes have 1166 distinct functions.
The genes include 1188 genes with a SEED annotation ontology across 679 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.004.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 155 contigs containing 3282083 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3354 new features were called, of which 39 are non-coding.
Output genome has the following feature types:
Coding gene 3315
Non-coding repeat 10
Non-coding rna 29
Overall, the genes have 2086 distinct functions.
The genes include 1615 genes with a SEED annotation ontology across 1098 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.013.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 127 contigs containing 5057090 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 4715 new features were called, of which 326 are non-coding.
Output genome has the following feature types:
Coding gene 4389
Non-coding crispr_array 1
Non-coding crispr_repeat 140
Non-coding crispr_spacer 139
Non-coding prophage 1
Non-coding repeat 4
Non-coding rna 41
Overall, the genes have 1860 distinct functions.
The genes include 2180 genes with a SEED annotation ontology across 938 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.003.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 87 contigs containing 3097432 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 3179 new features were called, of which 95 are non-coding.
Output genome has the following feature types:
Coding gene 3084
Non-coding crispr_array 1
Non-coding crispr_repeat 25
Non-coding crispr_spacer 24
Non-coding repeat 2
Non-coding rna 43
Overall, the genes have 1978 distinct functions.
The genes include 1572 genes with a SEED annotation ontology across 1051 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.014.fasta_assembly succeeded!
The RAST algorithm was applied to annotating a genome sequence comprised of 42 contigs containing 4266888 nucleotides.
No initial gene calls were provided.
Standard features were called using: glimmer3; prodigal.
A scan was conducted for the following additional feature types: rRNA; tRNA; selenoproteins; pyrrolysoproteins; repeat regions; crispr.
The genome features were functionally annotated using the following algorithm(s): Kmers V2; Kmers V1; protein similarity.
In addition to the remaining original 0 coding features and 0 non-coding features, 4344 new features were called, of which 359 are non-coding.
Output genome has the following feature types:
Coding gene 3985
Non-coding crispr_array 4
Non-coding crispr_repeat 151
Non-coding crispr_spacer 147
Non-coding prophage 1
Non-coding repeat 9
Non-coding rna 47
Overall, the genes have 2037 distinct functions.
The genes include 1868 genes with a SEED annotation ontology across 1127 distinct SEED functions.
The number of distinct functions can exceed the number of genes because some genes have multiple functions.
Bin.056.fasta_assembly succeeded!