KBase: The Department of Energy Systems Biology Knowledgebase

KBase is an open platform for comparative functional genomics and systems biology for microbes, plants and their communities, and for sharing results and methods with other scientists.

News

Great Lakes Bioenergy Research Center Workshop

On May 17, 2016, about 30 scientists attended a KBase workshop at the Great Lakes Bioenergy Research Center 2016 Annual Science Meeting held in Lake Geneva, Wisconsin. The workshop, entitled “Annotation, Modeling, and Comparison of Plant and Microbial Genomes in KBase,” was moderated by KBase scientist Chris Henry, with presentations by Janaka Edirisinghe and Sam […]

Workshop at the University of Nebraska

A two-day KBase workshop at the University of Nebraska, Lincoln, kicked off today with an overflowing group of 65 attendees. Led by KBase staff members Ben Allen, José Faria, Priya Ranjan and Roman Sutormin, the workshop started with an introduction to using KBase’s Narrative Interface to analyze data for single organisms, and then moved on […]

JGI Push to KBase Fixed

The DOE Joint Genome Institute’s (JGI) Genome Portal has a “Push to KBase” feature that lets users transfer some types of microbial reads and genome assembly data from JGI to KBase’s Narrative Interface for analysis using our apps. Recent changes to the JGI Genome Portal temporarily disabled the Push to KBase functionality. We are pleased to report that […]

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Events

Jun 16 - 20, 2016
in Boston, MA

KBase will be hosting both an exhibit booth and an all-day workshop at the 2016 general meeting for the American Society for Microbiology, ASM Microbe. Workshop: Thursday, June 16, 8:15am-4:15pm, BCEC Meeting Room 157B Session 019-WS: Genome-scale Metabolic Modeling of Environmental Isolates and Communities using the DOE Systems Biology Knowledgebase (KBase) Exhibit booth: 206      

More upcoming events…