Allows users to provide RNA-seq reads and the corresponding metadata to create an RNASeqSampleSet data object.
This App allows users to select the single-end or paired-end read files and provide the metadata for a set of samples to create an RNASeqSampleSet object. Note that the user must provide reads for at least two samples.
Users need to import single-end or paired-end read objects to the Data Pane before starting this App.
It is mandatory for users to select the "Library Type", "Domain", "RNA-seq Sample and Condition Labels," and provide the "RNA-seq Sample Set" (RNASeqSampleSet object name). All replicates for the same condition must have same label.
Users can optionally fill in additional metadata information in the advanced options.
- Arkin AP, Cottingham RW, Henry CS, Harris NL, Stevens RL, Maslov S, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature Biotechnology. 2018;36: 566. doi: 10.1038/nbt.4163 , https://www.nature.com/articles/nbt.4163
Module Commit: 7285d06df783f556ea16d581f93ad93a68b96779