Run the EA Utils program fastq-stats to compute and print basic summary stats.
This App generates a fastq statistics report using the EA Utils package.
Team members who developed & deployed algorithm in KBase: Priya Ranjan. For questions, please contact us.
Related Publications
- Arkin AP, Cottingham RW, Henry CS, Harris NL, Stevens RL, Maslov S, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature Biotechnology. 2018;36: 566. doi: 10.1038/nbt.4163 , https://www.nature.com/articles/nbt.4163
- EA Utils package source: , https://expressionanalysis.github.io/ea-utils/
App Specification:
https://github.com/kbaseapps/kb_ea_utils/tree/b09edaab7d1102890e8ff1dde33f142de38a64e6/ui/narrative/methods/fastq_statsModule Commit: b09edaab7d1102890e8ff1dde33f142de38a64e6